Janis
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  • Welcome to Janis!
  • About
  • Quickstart Guide
  • Pipeline concepts

Tutorials: Translation

  • CWL to Nextflow
  • Galaxy to Nextflow

Tutorials: API

  • Introduction to Janis
  • Building a Workflow
  • Wrapping a new tool
  • Naming and organising outputs
  • Adding a tool to a toolbox
  • Running your workflow
  • Containerising a tool

Shed / Toolbox

  • Pipelines
  • Tools
  • Data Types
  • Templates
  • List of operators
  • Janis Shed and Toolboxes

API documentation

  • Framework Documentation
  • Workflow
  • Command Tool
  • Python Tool
  • Janis Prepare
  • Expressions
  • Scattering
  • Secondary / Accessory Files
  • Unit Test Framework

Guides

  • Configuring Janis Assistant
  • Configuring resources (CPU / Memory)
  • Call Caching
  • Common Workflow Language
  • Workflow Description Language
  • Engine support
  • Updating Janis
  • Frequently asked questions
  • Common errors
  • Parsing CWL

Development

  • Development
  • Contributing
  • Testing
  • Releasing Janis
Janis
  • Docs »
  • unix
  • Edit on GitHub

unixΒΆ

Automatically generated index page for unix:

Tar (archive) Tar

(1 versions) v1.0.0


UncompressArchive UncompressArchive

(1 versions) v1.0.0


Awk awk

(1 versions) v1.0.0


Concatenate cat

(1 versions) v1.0.0


Echo echo

(1 versions) v1.0.0


Hello, World! hello

(1 versions) v1.0.0


Java compiler javacompiler

(1 versions) v1.0.0


MD5 Sum md5sum

(1 versions) v1.0.0


Sleep sleep

(1 versions) v1.0.0


Tar (unarchive) untar

(1 versions) v1.0.0



Revision bdefef3a.

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