Singularity¶
Template ID: singularity
Quickstart¶
Take note below how to configure the template. This quickstart only includes the fields you absolutely require. This will write a new configuration to ~/.janis.conf
. See configuring janis for more information.
janis init singularity \
--container_dir <value>
# or to find out more information
janis init singularity --help
OR you can insert the following lines into your template:
template:
id: singularity
container_dir: <value>
Fields¶
Required
ID | Type | Documentation |
---|---|---|
container_dir | <class ‘type’> |
Optional
ID | Type | Default | Documentation |
---|---|---|---|
singularity_load_instructions | Ensure singularity with this command executed in shell | ||
container_build_instructions | <class ‘str’> | singularity pull $image docker://${docker} | Instructions for building singularity, it’s recommended to not touch this setting. |
mail_program | <class ‘str’> | Mail program to pipe email to, eg: ‘sendmail -t’ |