Spartan¶
Template ID: spartan
https://dashboard.hpc.unimelb.edu.au/
Quickstart¶
Take note below how to configure the template. This quickstart only includes the fields you absolutely require. This will write a new configuration to ~/.janis.conf
. See configuring janis for more information.
janis init spartan \
--container_dir <value>
# or to find out more information
janis init spartan --help
OR you can insert the following lines into your template:
template:
id: spartan
container_dir: <value>
Fields¶
Required
ID | Type | Documentation |
---|---|---|
container_dir | <class ‘str’> |
Optional
ID | Type | Default | Documentation |
---|---|---|---|
intermediate_execution_dir | <class ‘str’> | computation directory for intermediate files (defaults to <exec>/execution OR <outputdir>/janis/execution) | |
queues | typing.Union[str, typing.List[str]] | physical | The queue to submit jobs to |
singularity_version | <class ‘str’> | 3.5.3 | |
send_job_emails | <class ‘bool’> | True | Send SLURM job emails to the listed email address |
catch_slurm_errors | <class ‘bool’> | True | Fail the task if Slurm kills the job (eg: memory / time) |
max_cores | <class ‘int’> | 32 | Override maximum number of cores (default: 32) |
max_ram | <class ‘int’> | 508 | Override maximum ram (default 508 [GB]) |
submission_queue | <class ‘str’> | physical | |
max_workflow_time | <class ‘int’> | 20100 | |
janis_memory_mb |