Singularity

Template ID: singularity

Quickstart

Take note below how to configure the template. This quickstart only includes the fields you absolutely require. This will write a new configuration to ~/.janis.conf. See configuring janis for more information.

janis init singularity \
    --container_dir <value>

# or to find out more information
janis init singularity --help

OR you can insert the following lines into your template:

template:
  id: singularity
  container_dir: <value>

Fields

Required

ID	Type	Documentation
container_dir	<class ‘type’>

Optional

ID	Type	Default	Documentation
singularity_load_instructions			Ensure singularity with this command executed in shell
container_build_instructions	<class ‘str’>	singularity pull $image docker://${docker}	Instructions for building singularity, it’s recommended to not touch this setting.
mail_program	<class ‘str’>		Mail program to pipe email to, eg: ‘sendmail -t’