Spartan

Template ID: spartan

https://dashboard.hpc.unimelb.edu.au/

Quickstart

Take note below how to configure the template. This quickstart only includes the fields you absolutely require. This will write a new configuration to ~/.janis.conf. See configuring janis for more information.

janis init spartan \
    --container_dir <value>

# or to find out more information
janis init spartan --help

OR you can insert the following lines into your template:

template:
  id: spartan
  container_dir: <value>

Fields

Required

ID	Type	Documentation
container_dir	<class ‘str’>

Optional

ID	Type	Default	Documentation
intermediate_execution_dir	<class ‘str’>		computation directory for intermediate files (defaults to <exec>/execution OR <outputdir>/janis/execution)
queues	typing.Union[str, typing.List[str]]	physical	The queue to submit jobs to
singularity_version	<class ‘str’>	3.5.3
send_job_emails	<class ‘bool’>	True	Send SLURM job emails to the listed email address
catch_slurm_errors	<class ‘bool’>	True	Fail the task if Slurm kills the job (eg: memory / time)
max_cores	<class ‘int’>	32	Override maximum number of cores (default: 32)
max_ram	<class ‘int’>	508	Override maximum ram (default 508 [GB])
submission_queue	<class ‘str’>	physical
max_workflow_time	<class ‘int’>	20100
janis_memory_mb